What is the format of this Bioinformatics Approach to Antimicrobial Resistance & HGT course?

This is an Recorded Lectures (Self-Paced) course delivered via our e-LMS platform. You will have access to pre-recorded video lectures, reading materials, assignments, quizzes, and hands-on projects that you can complete at your own pace.

Will I receive a certificate after completing this course?

Yes! Upon successful completion of all modules, assignments, and assessments, you will receive an e-Certification along with an e-Marksheet from DSTC (DSTC) that you can showcase on your CV and LinkedIn profile.

What are the prerequisites for this course?

No prior experience is required. This course is designed for beginners and takes you step by step from the basics to advanced topics.

How long will I have access to the course materials?

You will have access to all course materials for the duration of 3 Days (1.5 Hours Per Day). The self-paced format allows you to learn according to your own schedule through our online learning management system.

Is mentor support available during the course?

Yes, dedicated mentor support is available throughout the course. You can reach out for doubt-clearing sessions, project guidance, and career advice related to Bioinformatics. Our mentors are industry experts and experienced professionals. Enroll in Bioinformatics Approach to Antimicrobial Resistance & HGT today and take the next step in your professional journey. With expert-curated content, practical projects, and industry-recognized certification, this course is your gateway to mastering Bioinformatics skills that matter.

📚 Syllabus & Course Curriculum

Antimicrobial Resistance (AMR)

Module-by-module breakdown of Bioinformatics Approach to Antimicrobial Resistance & HGT, from foundations to a certified capstone project.

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Isolates

• Illumina and Nanopore data, and why long reads resolve plasmids
• Assembly with SPAdes or Flye and assessing quality with QUAST and BUSCO
• Species confirmation and contamination screening before anything else

Resistome

• ResFinder, CARD-RGI and AMRFinderPlus and their different curation choices
• Acquired genes against chromosomal point mutations conferring resistance
• Genotype-to-phenotype concordance and where prediction reliably fails

Mobilome

• Plasmid reconstruction, replicon typing and MOB typing
• Integrons, transposons and insertion sequences flanking resistance genes
• Chromosomal against plasmid location and its epidemiological weight

Phylogeny

• MLST, cgMLST and core genome SNP analysis for relatedness
• Recombination masking before tree building with Gubbins
• Distinguishing clonal expansion from independent horizontal acquisition

Reporting

• Submission to public databases and the metadata standards expected
• Outbreak reporting and the SNP thresholds used, with their limits
• Writing a genomic AMR report that a microbiologist can act on

Earn government-registered certification in Bioinformatics Approach to Antimicrobial Resistance & HGT

e-Certificate and e-Marksheet issued on successful completion.

View full course →

Scholar Registration

For scholars whose department, college or employer pays the fee. We raise a proforma invoice to your institution; you attach the signed processing letter or bank slip.

Academic Registry Hub

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Bioinformatics Approach to Antimicrobial Resistance & HGT

📚 Syllabus & Course Curriculum