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DSTC-01176 Online (e-LMS) Graduate / Intermediate

Bacterial Comparative Genomics

by - DSTC

Master Bacterial Comparative Genomics in 4 weeks through hands-on, project-based online training with DSTC.

★★★★★ Be the first to review • 3 Days · 4.5 hrs • e-Certificate Included
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From ₹2,500 + GST

Programme Parameters

Educational Level:
Graduate / Intermediate
Duration & Workload:
3 Days (4.5 Hrs)
Delivery Mode:
Online (e-LMS)
Prerequisites:
• A basic understanding of the subject area and fundamental programming or scientific concepts.
• A laptop or desktop with a stable internet connection.
• Willingness to complete assignments and the capstone project.

About This Course

Unraveling Evolutionary Threads: Exploring Bacterial Diversity Through Comparative Genomics. This advanced virtual course immerses participants in the analysis of bacterial genomes using cutting-edge bioinformatics tools and techniques. Every participant receives a verified e-Certificate and e-Marksheet from the Deep Science & Technology Consortium.

🎯 Program Aim

Unraveling Evolutionary Threads: Exploring Bacterial Diversity Through Comparative Genomics. This advanced virtual course immerses participants in the analysis of bacterial genomes using cutting-edge bioinformatics tools and techniques.

📋 Course Objectives

1. Build practical fluency in Comparative Genomics.
2. Put biotechnology techniques to work on real datasets and case studies.
3. Produce a reproducible, portfolio-ready project you can cite in a thesis, paper, or job application.

👥 Who Should Enroll?

• Master's and senior undergraduate students specializing in biotechnology
• R&D engineers and working professionals applying biotechnology in industry
• Academics and educators building research or teaching capacity in biotechnology
• Data and computational scientists moving into Comparative Genomics

🚀 Key Learning Outcomes

• Confidence to implement Comparative Genomics in real projects.
• A demonstrable biotechnology project for your research or industry portfolio.
• A verified e-Certificate of competency and e-Marksheet from the Deep Science & Technology Consortium.

💎 What You'll Gain

🎥

Live & Recorded Sessions

Lifetime access to class recordings
🎓

e-Certificate on Completion

Cryptographically verified credential
💬

Post-Programme Support

Direct access to mentors & council
💻

Hands-On Experience

Notebooks, real-world code & datasets

Curriculum Outline

Module 1 Outline

Environment Setup & Raw Data Processing

Install and configure genomics tools using Conda package management • Obtain and manage raw sequencing reads from public repositories • Perform quality control assessment and adapter trimming of raw data • Execute de novo genome assembly using SPAdes assembler

Module 2 Outline

Genome Refinement & Annotation

Polish draft assemblies to correct errors and improve consensus accuracy using Pilon • Reorder and scaffold contigs against reference genomes using RagTag • Perform multi-locus sequence typing for strain identification and epidemiology • Annotate draft genomes comprehensively using Prokka pipeline

Module 3 Outline

Functional & Comparative Genomics Analysis

Identify antimicrobial resistance genes using Abricate screening tool • Conduct pangenome analysis to reveal core and accessory genome dynamics • Explore comparative genomics webservers including BV-BRC for integrated analysis

Module 4 Outline

Evolutionary Dynamics & Phylogenomics

Reconstruct phylogenomic relationships from whole-genome comparisons • Analyze genetic diversity and population structure across bacterial isolates • Interpret horizontal gene transfer events and mobile genetic elements

Module 5 Outline

Antimicrobial Resistance & Virulence Profiling

Characterize resistance mechanisms using curated antimicrobial databases • Predict virulence factors and pathogenicity islands from genomic data • Correlate genotype with phenotype for clinical and environmental isolates

Module 6 Outline

Pangenome Construction & Visualization

Build pangenome matrices using Roary and related pangenome tools • Visualize pangenome dynamics through interactive graphical representations • Quantify gene presence-absence patterns and their biological significance

Module 7 Outline

Web-Based Comparative Genomics Platforms

Navigate BV-BRC comprehensive bacterial bioinformatics resource center • Integrate multi-omics data for systems-level bacterial analysis • Leverage cloud-based infrastructure for large-scale comparative studies

Technical Specifications

ParameterRequirement
Covered Tool / PlatformConda
Covered Tool / PlatformSPAdes
Covered Tool / PlatformPilon
Covered Tool / PlatformRagTag
Covered Tool / PlatformProkka
Covered Tool / PlatformMLST
Covered Tool / PlatformAbricate
Covered Tool / PlatformRoary
Covered Tool / PlatformBV-BRC
Covered Tool / PlatformWSL2

Frequently Asked Questions

This is an Recorded Lectures (Self-Paced) course delivered via our e-LMS platform. You will have access to pre-recorded video lectures, reading materials, assignments, quizzes, and hands-on projects that you can complete at your own pace.

Yes! Upon successful completion of all modules, assignments, and assessments, you will receive an e-Certification along with an e-Marksheet from DSTC (DSTC) that you can showcase on your CV and LinkedIn profile.

Learners should have a foundational understanding of Bioinformatics concepts. Familiarity with basic tools and programming is recommended.

You will have access to all course materials for the duration of 3 Days. The self-paced format allows you to learn according to your own schedule through our online learning management system.

Yes, dedicated mentor support is available throughout the course. You can reach out for doubt-clearing sessions, project guidance, and career advice related to Bioinformatics. Our mentors are industry experts and experienced professionals. Enroll in Bacterial Comparative Genomics today and take the next step in your professional journey. With expert-curated content, practical projects, and industry-recognized certification, this course is your gateway to mastering Bioinformatics skills that matter.

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