From raw reads to annotated SNPs: detection, filtering and downstream analysis.
Starting from โน1,399+GST
Register NowThis workshop covers the full SNP analysis pipeline, from read alignment and variant calling to filtering, annotation and association interpretation.
Align reads and call variants (GATK/bcftools)
Apply quality and hard-filtering criteria
Annotate variants (SnpEff/VEP)
Interpret functional and regulatory impact
Run basic association and population analysis
Genetics and genomics researchers
PhD scholars in molecular biology
Plant/animal breeding scientists
Clinical genomics analysts
An annotated VCF from your own data
Variant-filtering and QC skills
Familiarity with SnpEff/VEP annotation
Verified e-Certificate of Industrial Competency
Alignment, GATK/bcftools variant calling and VCF fundamentals.
Hard/soft filtering, quality metrics and SnpEff/VEP functional annotation.
Association basics, population structure and biological interpretation.
From raw reads to annotated SNPs: detection, filtering and downstream analysis.
This workshop covers the full SNP analysis pipeline, from read alignment and variant calling to filtering, annotation and association interpretation.
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